BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB038C10LP1|AL430519
(922 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1807 1811 0.0
3x_Contig1408 107 4e-23
>3x_Contig1807
Length = 66587
Score = 1811 bits (913), Expect = 0.0
Identities = 921/923 (99%), Gaps = 1/923 (0%)
Strand = Plus / Minus
Query: 1 aatctttcgaagtggtaattgtgatcaacggtaccatcggtacctgcctgacagatctgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4584 aatctttcgaagtggtaattgtgatcaacggtaccatcggtacctgcctgacagatctgt 4525
Query: 61 tttcaactcctgcactaggaagctcatcattaggctttaatccggccgaaggg-tgaatg 119
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 4524 tttcaactcctgcactaggaagctcatcattaggctttaatccggccgaaggggtgaatg 4465
Query: 120 accccttttcgctgggtttgtttgactcgtcatatggcaaaaatctccatctctttccat 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4464 accccttttcgctgggtttgtttgactcgtcatatggcaaaaatctccatctctttccat 4405
Query: 180 ccatatgccagtgctgactttgttcaagaacttagacaaggtggagaacattctaaagga 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4404 ccatatgccagtgctgactttgttcaagaacttagacaaggtggagaacattctaaagga 4345
Query: 240 aaggtataaaatcttgaggcctggtagttcttctgaagaagaaatcttaaaaaaattcta 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4344 aaggtataaaatcttgaggcctggtagttcttctgaagaagaaatcttaaaaaaattcta 4285
Query: 300 tctactgggagatcaattgactgaagccgatttgagattatacactaccatgatcagatt 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4284 tctactgggagatcaattgactgaagccgatttgagattatacactaccatgatcagatt 4225
Query: 360 cgatcctgtatacgctcagcacttcaaagccaacttgaacactgtccgtggcgggtatcc 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4224 cgatcctgtatacgctcagcacttcaaagccaacttgaacactgtccgtggcgggtatcc 4165
Query: 420 ttacatccatttgtggctcagaaacttgtactggaacggtaaaacttactaacttcaacc 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4164 ttacatccatttgtggctcagaaacttgtactggaacggtaaaacttactaacttcaacc 4105
Query: 480 atatcaaatggcactataccagatctcatccaagaatcaacccgttggcaatcacgccat 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4104 atatcaaatggcactataccagatctcatccaagaatcaacccgttggcaatcacgccat 4045
Query: 540 tgggtccttctcctaacattttgccattgtaaagaagagagatggccacagtattacagg 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4044 tgggtccttctcctaacattttgccattgtaaagaagagagatggccacagtattacagg 3985
Query: 600 gctacccacatatttcaatcattagtggttggattatacattcattagtctataataaat 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3984 gctacccacatatttcaatcattagtggttggattatacattcattagtctataataaat 3925
Query: 660 gatcaataaagatttgtcctcatccatattaagatgagaaaagatacgctaactcgagta 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3924 gatcaataaagatttgtcctcatccatattaagatgagaaaagatacgctaactcgagta 3865
Query: 720 ttttaaaatatcttcgacaaactccatactacaacttgtttctaatttattcacatcttc 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3864 ttttaaaatatcttcgacaaactccatactacaacttgtttctaatttattcacatcttc 3805
Query: 780 ccctctttcggtamgattagccatcaccgattgtttgatcgtcatactaattactaaaag 839
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3804 ccctctttcggtacgattagccatcaccgattgtttgatcgtcatactaattactaaaag 3745
Query: 840 gtagtgatattgcagataagtggtaacactaagcttaccaatatggcacaggtaattagt 899
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3744 gtagtgatattgcagataagtggtaacactaagcttaccaatatggcacaggtaattagt 3685
Query: 900 atgcaattagcaacttctaccaa 922
|||||||||||||||||||||||
Sbjct: 3684 atgcaattagcaacttctaccaa 3662
>3x_Contig1408
Length = 6607
Score = 107 bits (54), Expect = 4e-23
Identities = 126/150 (84%)
Strand = Plus / Minus
Query: 307 ggagatcaattgactgaagccgatttgagattatacactaccatgatcagattcgatcct 366
||||||||||| ||||| || || ||||||||||| ||||||| | ||||| || |||
Sbjct: 2518 ggagatcaattaactgaggctgacttgagattatatcctaccattgtaagatttgaccct 2459
Query: 367 gtatacgctcagcacttcaaagccaacttgaacactgtccgtggcgggtatccttacatc 426
||||||| |||||| |||||| |||| ||||||||| | || ||||| |||||||||
Sbjct: 2458 gtatacgttcagcatttcaaaaccaatttgaacactattcgctcggggtacccttacatc 2399
Query: 427 catttgtggctcagaaacttgtactggaac 456
|||||||||||||||||||| || ||||||
Sbjct: 2398 catttgtggctcagaaacttatattggaac 2369
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6581
Number of Sequences: 1807
Number of extensions: 6581
Number of successful extensions: 43
Number of sequences better than 1.0e-20: 2
length of query: 922
length of database: 10,358,551
effective HSP length: 16
effective length of query: 906
effective length of database: 10,329,639
effective search space: 9358652934
effective search space used: 9358652934
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)